Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: USP2 ENSPTRG00000004384

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Description

ubiquitin specific peptidase 2 [Source:VGNC Symbol;Acc:VGNC:12772]

Location

Chromosome 11: 119,828,597-119,855,259 reverse strand.

Pan_tro_3.0:CM000325.3

About this gene

This gene has 4 transcripts (splice variants), 177 orthologues and 56 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000008132.4	USP2-202	3914	605aa	ENSPTRP00000007507.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2Q4Y6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000109255.1	USP2-201	3060	396aa	ENSPTRP00000068058.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RTK7 A0A6D2WFB1	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000079485.1	USP2-203	1188	395aa	ENSPTRP00000061571.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RAB0	-
ENSPTRT00000077793.1	USP2-204	1089	362aa	ENSPTRP00000062249.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RCX3 A0A6D2W5W2	-

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Summary

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