Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: HMBS ENSPTRG00000004368

.

Description

hydroxymethylbilane synthase [Source:VGNC Symbol;Acc:VGNC:11809]

Location

Chromosome 11: 119,553,814-119,562,499 forward strand.

Pan_tro_3.0:CM000325.3

About this gene

This gene has 5 transcripts (splice variants) and 228 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000008109.4	HMBS-202	1530	361aa	ENSPTRP00000007486.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2Q4X6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000101508.1	HMBS-204	2223	344aa	ENSPTRP00000073864.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SA04	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSPTRT00000095833.1	HMBS-201	1443	330aa	ENSPTRP00000071461.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S3E9	-
ENSPTRT00000087206.1	HMBS-203	966	321aa	ENSPTRP00000072070.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S533	-
ENSPTRT00000107155.1	HMBS-205	555	184aa	ENSPTRP00000064296.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RHZ9	-

.

Summary

.

.