Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LGI1 ENSPTRG00000002771

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Description

leucine rich glioma inactivated 1 [Source:NCBI gene (formerly Entrezgene);Acc:450619]

Location

Chromosome 10: 95,153,775-95,201,652 forward strand.

Pan_tro_3.0:CM000324.3

About this gene

This gene has 6 transcripts (splice variants), 336 orthologues and 22 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000086732.1	LGI1-204	1674	557aa	ENSPTRP00000083692.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8PE37 Q1EGL2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000005231.4	LGI1-201	2251	509aa	ENSPTRP00000004835.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2J8PE35 A0A6D2WAH1	-
ENSPTRT00000108625.1	LGI1-205	1602	533aa	ENSPTRP00000068393.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RVR5 A0A6D2WL94	-
ENSPTRT00000108148.1	LGI1-206	864	288aa	ENSPTRP00000072316.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S5P5	-
ENSPTRT00000102726.1	LGI1-203	711	236aa	ENSPTRP00000080664.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SUN1 A0A6D2XHW1	-
ENSPTRT00000084574.1	LGI1-202	456	151aa	ENSPTRP00000077979.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SLQ0 A0A6D2XJX8	-

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Summary

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