Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PRPF3 ENSPTRG00000001254

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Description

pre-mRNA processing factor 3 [Source:VGNC Symbol;Acc:VGNC:1470]

Location

Chromosome 1: 128,251,097-128,282,631 forward strand.

Pan_tro_3.0:CM000314.3

About this gene

This gene has 4 transcripts (splice variants), 196 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000076687.1	PRPF3-202	2354	683aa	ENSPTRP00000061550.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2Y3N4 G2HGL9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000002322.5	PRPF3-201	2518	112aa	ENSPTRP00000002125.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2PZW7	-
ENSPTRT00000095892.1	PRPF3-204	2010	669aa	ENSPTRP00000073428.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S8X4	-
ENSPTRT00000083154.1	PRPF3-203	1842	613aa	ENSPTRP00000068008.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RTG6	-

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Summary

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