Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: VANGL1 ENSPTRG00000001147

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Description

VANGL planar cell polarity protein 1 [Source:VGNC Symbol;Acc:VGNC:1721]

Location

Chromosome 1: 120,186,687-120,239,586 reverse strand.

Pan_tro_3.0:CM000314.3

About this gene

This gene has 2 transcripts (splice variants), 266 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000002139.5	VANGL1-201	6028	524aa	ENSPTRP00000001965.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XBG8 H2PZR2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000090545.1	VANGL1-202	1566	521aa	ENSPTRP00000086614.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TBJ8	-

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Summary

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