Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: VCAM1 ENSPTRG00000001009

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Description

vascular cell adhesion molecule 1 [Source:VGNC Symbol;Acc:VGNC:1639]

Location

Chromosome 1: 101,362,281-101,379,882 forward strand.

Pan_tro_3.0:CM000314.3

About this gene

This gene has 3 transcripts (splice variants), 208 orthologues and 38 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000001892.3	VCAM1-202	3089	650aa	ENSPTRP00000001735.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2WFP1 H2PZH7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSPTRT00000083564.1	VCAM1-201	2882	558aa	ENSPTRP00000061658.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RAK0 A0A6D2WDL8	-
ENSPTRT00000087281.1	VCAM1-203	1356	451aa	ENSPTRP00000086349.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TAW3 A0A6D2XT81	-

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Summary

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