Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SRRM1 ENSPTRG00000000349

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Description

serine and arginine repetitive matrix 1 [Source:VGNC Symbol;Acc:VGNC:8500]

Location

Chromosome 1: 23,839,272-23,869,505 forward strand.

Pan_tro_3.0:CM000314.3

About this gene

This gene has 5 transcripts (splice variants) and 149 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000000690.6	SRRM1-202	4041	918aa	ENSPTRP00000000609.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2PYC0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000092758.1	SRRM1-201	4314	835aa	ENSPTRP00000092355.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3TSW9	-
ENSPTRT00000109537.1	SRRM1-203	4000	904aa	ENSPTRP00000065401.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2VWD8 K7D4C6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSPTRT00000092222.1	SRRM1-205	2646	881aa	ENSPTRP00000066619.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RPK2	-
ENSPTRT00000081759.1	SRRM1-204	2370	789aa	ENSPTRP00000082188.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3T004	-

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Summary

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