Transcript: ENST00000449264.3 TNF-208

Description

tumor necrosis factor [Source:HGNC Symbol;Acc:HGNC:11892]

Gene Synonyms

DIF, TNF-ALPHA, TNFA, TNFSF2

Location

Chromosome 6: 31,575,565-31,578,336 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 214 domains and features, is associated with 1208 variant alleles and maps to 1260 oligo probes.

Gene

This transcript is a product of gene ENSG00000232810.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000449264.3	TNF-208	1678	233aa	ENSP00000398698.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4702	P01375 Q5STB3	NM_000594.4	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000699334.1	TNF-209	656	73aa	ENSP00000514308.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A8V8TNL2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Transcript: ENST00000449264.3 TNF-208

Protein summary

Protein domains for ENSP00000398698.2

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Transcript: ENST00000449264.3 TNF-208

Protein summary

Protein domains for ENSP00000398698.2

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