Transcript: ENST00000393354.7 B4GALNT2-202

Description

beta-1,4-N-acetyl-galactosaminyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:24136]

Gene Synonyms

CAD, GALGT2, SDA

Location

Chromosome 17: 49,132,769-49,176,840 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 9 domains and features, is associated with 19850 variant alleles and maps to 386 oligo probes.

Gene

This transcript is a product of gene ENSG00000167080.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000393354.7	B4GALNT2-202	8657	506aa	ENSP00000377022.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54139	Q8NHY0-2	NM_001159387.2	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000300404.2	B4GALNT2-201	1906	566aa	ENSP00000300404.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11544	Q8NHY0-1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000504681.5	B4GALNT2-203	1819	480aa	ENSP00000425510.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54140	Q8NHY0-3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

Transcript: ENST00000393354.7 B4GALNT2-202

Protein summary

Protein domains for ENSP00000377022.3

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Transcript: ENST00000393354.7 B4GALNT2-202

Protein summary

Protein domains for ENSP00000377022.3

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