Summary
Sequence
Protein Information
Genetic Variation
- Variant table
- Variant image
- Haplotypes
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: ENST00000207457.8 TEKT2-201

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Description

tektin 2 [Source:HGNC Symbol;Acc:HGNC:11725]

Gene Synonyms

TEKTB1

Location

Chromosome 1: 36,084,094-36,088,275 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 24 domains and features, is associated with 2469 variant alleles and maps to 392 oligo probes.

Gene

This transcript is a product of gene ENSG00000092850.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000207457.8	TEKT2-201	1490	430aa	ENSP00000207457.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS401	Q9UIF3	NM_014466.3	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000473120.1	TEKT2-203	753	96aa	ENSP00000432793.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YD25	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000469024.1	TEKT2-202	1738	108aa	ENSP00000434183.1	Nonsense mediated decay		E9PRS9	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

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Protein summary

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Protein domains for ENSP00000207457.3

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