Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: trpc5a ENSONIG00000006300

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Description

transient receptor potential cation channel, subfamily C, member 5a [Source:ZFIN;Acc:ZDB-GENE-040812-1]

Location

Primary_assembly LG3: 37,709,096-37,808,605 reverse strand.

O_niloticus_UMD_NMBU:CM007483.2

About this gene

This gene has 10 transcripts (splice variants), 215 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSONIT00000042808.1	trpc5a-204	3198	1062aa	ENSONIP00000050409.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSONIT00000034673.1	trpc5a-201	3129	1042aa	ENSONIP00000051362.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000007948.2	trpc5a-203	2859	952aa	ENSONIP00000007943.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3JGF2	-
ENSONIT00000037953.1	trpc5a-202	2772	917aa	ENSONIP00000026951.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000067319.1	trpc5a-207	2550	843aa	ENSONIP00000037116.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000056387.1	trpc5a-208	2427	802aa	ENSONIP00000077965.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000062713.1	trpc5a-206	2388	789aa	ENSONIP00000051369.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000084856.1	trpc5a-209	2351	737aa	ENSONIP00000081601.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000051858.1	trpc5a-205	2223	740aa	ENSONIP00000030618.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000043393.1	trpc5a-210	1248	409aa	ENSONIP00000060160.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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