Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: sox6 ENSONIG00000006148

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Description

SRY-box transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-081120-6]

Location

Primary_assembly LG1: 19,569,787-19,694,310 forward strand.

O_niloticus_UMD_NMBU:CM007481.2

About this gene

This gene has 10 transcripts (splice variants), 208 orthologues and 23 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSONIT00000061118.1	sox6-201	3029	804aa	ENSONIP00000065126.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSONIT00000071313.1	sox6-202	3017	800aa	ENSONIP00000064885.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000052943.1	sox6-203	2879	754aa	ENSONIP00000075899.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000041131.1	sox6-204	2870	751aa	ENSONIP00000078316.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000038833.1	sox6-208	2334	777aa	ENSONIP00000051380.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000007747.2	sox6-209	2322	773aa	ENSONIP00000007742.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3JFV1	-
ENSONIT00000007748.2	sox6-207	2307	768aa	ENSONIP00000007743.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3JFV2	-
ENSONIT00000038157.1	sox6-205	2274	728aa	ENSONIP00000034676.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000039380.1	sox6-206	2250	720aa	ENSONIP00000031102.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000057551.1	sox6-210	2142	713aa	ENSONIP00000079571.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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