Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: clstn1 ENSONIG00000002377

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Description

calsyntenin 1 [Source:NCBI gene;Acc:100699827]

Location

Primary_assembly LG20: 22,038,953-22,074,185 forward strand.

O_niloticus_UMD_NMBU:CM007501.2

About this gene

This gene has 10 transcripts (splice variants), 206 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSONIT00000033725.1	clstn1-207	2943	980aa	ENSONIP00000072432.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSONIT00000080910.1	clstn1-201	3655	960aa	ENSONIP00000072000.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000070736.1	clstn1-202	3604	943aa	ENSONIP00000033935.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000002971.2	clstn1-203	3046	954aa	ENSONIP00000002970.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3J280	-
ENSONIT00000045068.1	clstn1-204	2974	930aa	ENSONIP00000031797.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000070656.1	clstn1-205	2896	904aa	ENSONIP00000070913.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000002972.2	clstn1-206	2880	959aa	ENSONIP00000002971.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3J281	-
ENSONIT00000055435.1	clstn1-208	2820	939aa	ENSONIP00000059502.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000082501.1	clstn1-209	2796	931aa	ENSONIP00000055106.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000085032.1	clstn1-210	2742	913aa	ENSONIP00000038398.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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