Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COL25A1 ENSOCUG00000000201

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Description

collagen type XXV alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:18603]

Location

Chromosome 15: 40,229,330-40,757,293 forward strand.

OryCun2.0:CM000804.1

About this gene

This gene has 5 transcripts (splice variants), 138 orthologues and 35 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSOCUT00000049497.1	COL25A1-201	6735	696aa	ENSOCUP00000046747.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSOCUT00000037391.1	COL25A1-202	6609	654aa	ENSOCUP00000027940.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSOCUT00000050560.1	COL25A1-203	2687	644aa	ENSOCUP00000037127.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSOCUT00000000203.4	COL25A1-205	1602	524aa	ENSOCUP00000000180.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G1SCU0	-
ENSOCUT00000028889.3	COL25A1-204	1492	333aa	ENSOCUP00000024607.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G1U5C8	-

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Summary

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