Transcript: ENSMUST00000237633.2 Zbtb9-202

Description

zinc finger and BTB domain containing 9 [Source:MGI Symbol;Acc:MGI:1918022]

Gene Synonyms

3930402F13Rik

Location

About this transcript

This transcript has 4 exons, is annotated with 1 domain and feature, is associated with 2575 variant alleles and maps to 158 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000120016.3	Zbtb9-201	2796	459aa	ENSMUSP00000112778.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37520	Q8CDC7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000237633.2	Zbtb9-202	3432	459aa	ENSMUSP00000157541.2	Nonsense mediated decay	CCDS37520	Q8CDC7	-

Summary

Statistics

Exons: 4, Coding exons: 1, Transcript length: 3,432 bps, Translation length: 459 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8CDC7

CCDS

This transcript is a member of the Mouse CCDS set: CCDS37520

Version

ENSMUST00000237633.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

inferred transcript model [Definitions]

RNA-Seq supported partial