Transcript: ENSMUST00000234520.2 Gfer-204

Description

growth factor, augmenter of liver regeneration [Source:MGI Symbol;Acc:MGI:107757]

Gene Synonyms

Alr, ERV1

Location

Chromosome 17: 24,912,164-24,915,086 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 1 domain and feature, is associated with 600 variant alleles and maps to 191 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000040888.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000046839.10	Gfer-201	1776	198aa	ENSMUSP00000049186.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28492	P56213	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000234859.2	Gfer-206	1706	77aa	ENSMUSP00000157365.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3Q4EII8	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000234235.2	Gfer-203	682	187aa	ENSMUSP00000157249.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3Q4EGL6	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000234520.2	Gfer-204	1177	198aa	ENSMUSP00000157116.2	Nonsense mediated decay	CCDS28492	P56213	-
ENSMUST00000234197.2	Gfer-202	1162	198aa	ENSMUSP00000157329.2	Nonsense mediated decay	CCDS28492	P56213	-
ENSMUST00000234811.2	Gfer-205	897	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,177 bps, Translation length: 198 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P56213

CCDS

This transcript is a member of the Mouse CCDS set: CCDS28492

Version

ENSMUST00000234520.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

Transcript: ENSMUST00000234520.2 Gfer-204

Summary

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Transcript: ENSMUST00000234520.2 Gfer-204

Summary

About Us

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