Transcript: ENSMUST00000232527.2 Rps6ka2-204

Description

ribosomal protein S6 kinase, polypeptide 2 [Source:MGI Symbol;Acc:MGI:1342290]

Gene Synonyms

90kDa, D17Wsu134e, Rps6ka-rs1, Rsk3, p90rsk, pp90rsk

Location

Chromosome 17: 7,495,315-7,526,788 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 12 domains and features, is associated with 1831 variant alleles and maps to 49 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000023809.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000024575.8	Rps6ka2-201	5406	733aa	ENSMUSP00000024575.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28376	Q9WUT3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000232527.2	Rps6ka2-204	924	223aa	ENSMUSP00000156179.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A338P701	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000232617.2	Rps6ka2-205	3280	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000231530.2	Rps6ka2-202	1650	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000232136.2	Rps6ka2-203	538	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 924 bps, Translation length: 223 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSMUST00000232527.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000232527.2 Rps6ka2-204

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Transcript: ENSMUST00000232527.2 Rps6ka2-204

Summary

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