Transcript: ENSMUST00000231716.2 Cd80-202

Description

CD80 antigen [Source:MGI Symbol;Acc:MGI:101775]

Gene Synonyms

B7-1, B7.1, Cd28l, Ly-53, Ly53

Location

Chromosome 16: 38,275,923-38,316,697 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 18 domains and features, is associated with 2456 variant alleles and maps to 236 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000075122.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000231716.2	Cd80-202	3173	306aa	ENSMUSP00000156031.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28168	Q00609 Q549R2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000099816.3	Cd80-201	1701	306aa	ENSMUSP00000097404.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28168	Q00609 Q549R2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000232409.2	Cd80-203	748	212aa	ENSMUSP00000156252.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q00609-2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 3,173 bps, Translation length: 306 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q00609

CCDS

This transcript is a member of the Mouse CCDS set: CCDS28168

Version

ENSMUST00000231716.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

upstream ATG [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000231716.2 Cd80-202

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Transcript: ENSMUST00000231716.2 Cd80-202

Summary

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