Transcript: ENSMUST00000231369.2 Ccdc188-202

Description

coiled-coil domain containing 188 [Source:MGI Symbol;Acc:MGI:3647803]

Gene Synonyms

Gm7873

Location

Chromosome 16: 18,035,743-18,038,209 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 12 domains and features, is associated with 461 variant alleles and maps to 82 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000090777.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSMUST00000231369.2	Ccdc188-202	1588	436aa	ENSMUSP00000155981.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A338P6G2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000231860.2	Ccdc188-203	1330	415aa	ENSMUSP00000156197.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A338P6Z0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000167061.2	Ccdc188-201	747	249aa	ENSMUSP00000132278.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6WEU2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000231965.2	Ccdc188-204	1517	307aa	ENSMUSP00000156029.2	Nonsense mediated decay	A0A338P6M1	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,588 bps, Translation length: 436 residues

Version

ENSMUST00000231369.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000231369.2 Ccdc188-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000231369.2 Ccdc188-202

Summary

About Us

Get help

Our sister sites

Follow us