Transcript: ENSMUST00000230050.2 Polr3h-203

Description

polymerase (RNA) III (DNA directed) polypeptide H [Source:MGI Symbol;Acc:MGI:1926179]

Gene Synonyms

5031409G22Rik, RPC8

Location

Chromosome 15: 81,800,602-81,810,123 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 8 domains and features, is associated with 1077 variant alleles and maps to 156 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000022476.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000023113.7	Polr3h-201	2542	204aa	ENSMUSP00000023113.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27676	Q9D2C6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000230050.2	Polr3h-203	765	175aa	ENSMUSP00000155181.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2R8VK29	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000230669.2	Polr3h-205	3030	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000230765.2	Polr3h-206	1290	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000230842.2	Polr3h-207	498	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000230066.2	Polr3h-204	438	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000229402.2	Polr3h-202	985	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 765 bps, Translation length: 175 residues

Version

ENSMUST00000230050.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000230050.2 Polr3h-203

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Transcript: ENSMUST00000230050.2 Polr3h-203

Summary

About Us

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