Transcript: ENSMUST00000229634.2 Fam135b-203

Description

family with sequence similarity 135, member B [Source:MGI Symbol;Acc:MGI:1917613]

Gene Synonyms

1700010C24Rik, A830008O07Rik

Location

Chromosome 15: 71,317,525-71,334,249 reverse strand.

About this transcript

This transcript has 8 exons, is associated with 1528 variant alleles and maps to 130 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000036800.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000022953.10	Fam135b-201	18692	1403aa	ENSMUSP00000022953.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS49626	Q9DAI6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000229189.2	Fam135b-202	670	159aa	ENSMUSP00000155239.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2R8VHM2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000230569.2	Fam135b-204	1688	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000229634.2	Fam135b-203	1493	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 8, Coding exons: 0, Transcript length: 1,493 bps,

Version

ENSMUST00000229634.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000229634.2 Fam135b-203

Summary

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Transcript: ENSMUST00000229634.2 Fam135b-203

Summary

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