Transcript: ENSMUST00000228501.2 Bmp1-207

Description

bone morphogenetic protein 1 [Source:MGI Symbol;Acc:MGI:88176]

Location

Chromosome 14: 70,717,032-70,724,079 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 881 variant alleles and maps to 126 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000022098.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000022693.9	Bmp1-201	3684	991aa	ENSMUSP00000022693.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS36972	P98063	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000227944.2	Bmp1-206	5365	57aa	ENSMUSP00000154121.2	Nonsense mediated decay		A0A2I3BQB3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000226906.2	Bmp1-205	4340	194aa	ENSMUSP00000154610.2	Nonsense mediated decay		A0A2I3BRJ8	-
ENSMUST00000226246.2	Bmp1-202	3472	194aa	ENSMUSP00000154104.2	Nonsense mediated decay		A0A2I3BRJ8	-
ENSMUST00000228501.2	Bmp1-207	507	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000226601.2	Bmp1-204	2736	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000226539.2	Bmp1-203	452	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 507 bps,

Version

ENSMUST00000228501.2

Type

Protein coding CDS not defined

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000228501.2 Bmp1-207

Summary

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Transcript: ENSMUST00000228501.2 Bmp1-207

Summary

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