Transcript: ENSMUST00000227283.2 Vmn1r16-202

Description

vomeronasal 1 receptor 16 [Source:MGI Symbol;Acc:MGI:2159465]

Gene Synonyms

V1rc29

Location

Chromosome 6: 57,295,037-57,306,479 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 19 domains and features, is associated with 1379 variant alleles and maps to 98 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000115792.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000227283.2	Vmn1r16-202	5813	303aa	ENSMUSP00000154566.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS20179	K7N775	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000228356.2	Vmn1r16-203	3492	286aa	ENSMUSP00000154643.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2I3BRL5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000227168.2	Vmn1r16-201	912	303aa	ENSMUSP00000154001.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS20179	K7N775	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 5,813 bps, Translation length: 303 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS20179

Version

ENSMUST00000227283.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

inferred transcript model [Definitions]

RNA-Seq supported partial

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000227283.2 Vmn1r16-202

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Transcript: ENSMUST00000227283.2 Vmn1r16-202

Summary

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