Transcript: ENSMUST00000225486.2 Gm49395-204

Description

predicted gene, 49395 [Source:MGI Symbol;Acc:MGI:6121627]

Location

About this transcript

This transcript has 3 exons, is associated with 1211 variant alleles and maps to 146 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSMUST00000224997.2	Gm49395-202	1057	57aa	ENSMUSP00000153073.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286YCN5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000224495.2	Gm49395-201	645	57aa	ENSMUSP00000152908.2	Nonsense mediated decay	A0A286YCN5	-
ENSMUST00000225486.2	Gm49395-204	535	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-
ENSMUST00000225093.2	Gm49395-203	501	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 535 bps,

Version

ENSMUST00000225486.2

Type

Protein coding CDS not defined

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.