Transcript: ENSMUST00000225029.2 BC147527-202

Description

cDNA sequence BC147527 [Source:MGI Symbol;Acc:MGI:4840510]

Location

Chromosome 13: 120,761,928-120,770,315 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 1663 variant alleles and maps to 184 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000094796.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000225029.2	BC147527-202	1595	167aa	ENSMUSP00000153422.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56910	Q3V185	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000081558.8	BC147527-201	504	167aa	ENSMUSP00000111141.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56910	Q3V185	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,

Summary

Statistics

Exons: 5, Coding exons: 1, Transcript length: 1,595 bps, Translation length: 167 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS56910

Version

ENSMUST00000225029.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000225029.2 BC147527-202

Summary

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Transcript: ENSMUST00000225029.2 BC147527-202

Summary

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