Transcript: ENSMUST00000224506.2 Rgr-202

Description

retinal G protein coupled receptor [Source:MGI Symbol;Acc:MGI:1929473]

Gene Synonyms

RGR opsin

Location

Chromosome 14: 36,760,186-36,766,883 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 1011 variant alleles and maps to 166 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000021804.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000022338.7	Rgr-201	4240	291aa	ENSMUSP00000022338.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26949	Q543X1 Q9Z2B3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000225070.2	Rgr-203	4704	261aa	ENSMUSP00000153012.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A286YCJ5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000225229.2	Rgr-204	648	89aa	ENSMUSP00000153565.2	Nonsense mediated decay		A0A286YDT4	-
ENSMUST00000225403.2	Rgr-205	633	112aa	ENSMUSP00000153006.2	Nonsense mediated decay		A0A286YCJ0	-
ENSMUST00000224506.2	Rgr-202	584	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000225634.2	Rgr-206	572	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 584 bps,

Version

ENSMUST00000224506.2

Type

Protein coding CDS not defined

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000224506.2 Rgr-202

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Transcript: ENSMUST00000224506.2 Rgr-202

Summary

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