Transcript: ENSMUST00000223709.2 Mipep-202

Description

mitochondrial intermediate peptidase [Source:MGI Symbol;Acc:MGI:1917728]

Gene Synonyms

5730405E07Rik

Location

Chromosome 14: 61,022,087-61,102,187 forward strand.

About this transcript

This transcript has 17 exons, is associated with 4618 variant alleles and maps to 202 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000021993.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000063562.9	Mipep-201	3015	711aa	ENSMUSP00000069840.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS49517	A6H611	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000225043.2	Mipep-204	1548	210aa	ENSMUSP00000153184.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A286YCX4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000224635.2	Mipep-203	3442	711aa	ENSMUSP00000153502.2	Nonsense mediated decay	CCDS49517	A6H611	-
ENSMUST00000225506.2	Mipep-205	3172	568aa	ENSMUSP00000153374.2	Nonsense mediated decay		A0A286YDC5	-
ENSMUST00000223709.2	Mipep-202	2821	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 17, Coding exons: 0, Transcript length: 2,821 bps,

Version

ENSMUST00000223709.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000223709.2 Mipep-202

Summary

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Transcript: ENSMUST00000223709.2 Mipep-202

Summary

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