Mouse (GRCm39)
Description

pre-mRNA processing factor 4B [Source:MGI Symbol;Acc:MGI:109584]

Gene Synonyms

Prp4, Prp4k, Prpk

Location
About this transcript

This transcript has 17 exons, is associated with 1126 variant alleles and maps to 326 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000077853.5Prpf4b-20178441007aaENSMUSP00000077019.4
 
Protein coding
CCDS26448Q61136 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000222509.2Prpf4b-20836481007aaENSMUSP00000152654.2
 
Nonsense mediated decay
CCDS26448Q61136 TSL:2
ENSMUST00000220965.2Prpf4b-2022572393aaENSMUSP00000152349.2
 
Nonsense mediated decay
A0A1Y7VLT3 TSL:2CDS 5' incomplete
ENSMUST00000221077.2Prpf4b-20379170aaENSMUSP00000152545.2
 
Nonsense mediated decay
A0A1Y7VM68 TSL:3CDS 5' incomplete
ENSMUST00000221784.2Prpf4b-207958No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000222834.2Prpf4b-209937No protein-
 
Protein coding CDS not defined
-TSL:2
ENSMUST00000223228.2Prpf4b-210520No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000221156.2Prpf4b-205419No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000221639.2Prpf4b-2061727No protein-
 
Retained intron
-TSL:1
ENSMUST00000221087.2Prpf4b-204676No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 17, Coding exons: 10, Transcript length: 2,572 bps, Translation length: 393 residues

Transcript Support Level (TSL)

TSL:2

Incomplete CDS

CDS 5' incomplete

Version

ENSMUST00000220965.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.