Transcript: ENSMUST00000216227.2 Ankk1-202

Description

ankyrin repeat and kinase domain containing 1 [Source:MGI Symbol;Acc:MGI:3045301]

Gene Synonyms

9930020N01Rik

Location

Chromosome 9: 49,329,109-49,330,736 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 595 variant alleles and maps to 34 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000032257.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000034792.7	Ankk1-201	2714	745aa	ENSMUSP00000034792.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS40616	Q8BZ25	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000216227.2	Ankk1-202	461	94aa	ENSMUSP00000149708.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A1L1SS17	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 461 bps, Translation length: 94 residues

Transcript Support Level (TSL)

TSL:2

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSMUST00000216227.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000216227.2 Ankk1-202

Summary

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Transcript: ENSMUST00000216227.2 Ankk1-202

Summary

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