Transcript: ENSMUST00000212226.2 Gm45826-201

Description

predicted gene 45826 [Source:MGI Symbol;Acc:MGI:5804941]

Location

Chromosome 8: 19,190,794-19,209,456 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 6 domains and features, is associated with 1355 variant alleles and maps to 53 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000110641.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000212226.2	Gm45826-201	265	71aa	ENSMUSP00000148411.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8K4N2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000212965.2	Gm45826-202	695	28aa	ENSMUSP00000148505.2	Nonsense mediated decay		A0A1D5RLU1	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 265 bps, Translation length: 71 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8K4N2

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000212226.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000212226.2 Gm45826-201

Summary

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Transcript: ENSMUST00000212226.2 Gm45826-201

Summary

About Us

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