Transcript: ENSMUST00000201316.4 Tmem270-202

Description

transmembrane protein 270 [Source:MGI Symbol;Acc:MGI:1923879]

Gene Synonyms

1700111I05Rik, Wbscr28

Location

Chromosome 5: 134,930,447-134,935,587 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 9 domains and features, is associated with 807 variant alleles and maps to 111 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000040576.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000201316.4	Tmem270-202	847	264aa	ENSMUSP00000144496.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS80423	Q6UJB9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000047305.6	Tmem270-201	932	209aa	ENSMUSP00000045190.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS39313	Q6UJB9-2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 847 bps, Translation length: 264 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6UJB9

CCDS

This transcript is a member of the Mouse CCDS set: CCDS80423

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000201316.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000201316.4 Tmem270-202

Summary

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Transcript: ENSMUST00000201316.4 Tmem270-202

Summary

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