Transcript: ENSMUST00000200338.2 Ppihl-202

Description

peptidyl prolyl isomerase H like [Source:MGI Symbol;Acc:MGI:3645078]

Gene Synonyms

Gm7879

Location

Chromosome 5: 44,070,489-44,071,252 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 10 domains and features, is associated with 705 variant alleles and maps to 382 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000033036.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000122204.3	Ppihl-201	774	177aa	ENSMUSP00000142767.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9D868-2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000200338.2	Ppihl-202	635	134aa	ENSMUSP00000142776.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2BGI9	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 635 bps, Translation length: 134 residues

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000200338.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000200338.2 Ppihl-202

Summary

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Transcript: ENSMUST00000200338.2 Ppihl-202

Summary

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