Transcript: ENSMUST00000200206.5 Cfi-202

Description

complement component factor i [Source:MGI Symbol;Acc:MGI:105937]

Location

Chromosome 3: 129,629,533-129,644,442 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 9 domains and features, is associated with 1685 variant alleles and maps to 34 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000058952.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000077918.7	Cfi-201	2079	603aa	ENSMUSP00000077074.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS17835	Q61129	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000200206.5	Cfi-202	651	145aa	ENSMUSP00000142975.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A0G2JF07	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 651 bps, Translation length: 145 residues

Transcript Support Level (TSL)

TSL:3

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSMUST00000200206.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000200206.5 Cfi-202

Summary

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Transcript: ENSMUST00000200206.5 Cfi-202

Summary

About Us

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