Transcript: ENSMUST00000194057.6 Mael-202

Description

maelstrom spermatogenic transposon silencer [Source:MGI Symbol;Acc:MGI:2138453]

Gene Synonyms

4933405K18Rik

Location

Chromosome 1: 166,028,770-166,066,316 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 9 domains and features, is associated with 2498 variant alleles and maps to 168 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000040629.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000038782.4	Mael-201	1546	434aa	ENSMUSP00000045828.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS15448	Q8BVN9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000194057.6	Mael-202	1691	420aa	ENSMUSP00000141652.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A0A6YWQ9	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,691 bps, Translation length: 420 residues

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000194057.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000194057.6 Mael-202

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Transcript: ENSMUST00000194057.6 Mael-202

Summary

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