Mouse (GRCm39)
Description

ubiquitin specific peptidase 40 [Source:MGI Symbol;Acc:MGI:2443184]

Gene Synonyms

B230215L03Rik

Location
About this transcript

This transcript has 32 exons, is annotated with 12 domains and features, is associated with 2642 variant alleles and maps to 297 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000187758.7Usp40-20439771235aaENSMUSP00000140107.2
 
Protein coding
CCDS78645Q8BWR4 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENSMUST00000040783.11Usp40-20150491146aaENSMUSP00000038533.5
 
Protein coding
CCDS15137Q8BWR4-2 GENCODE basicTSL:1
ENSMUST00000189409.7Usp40-207463342aaENSMUSP00000140240.2
 
Nonsense mediated decay
A0A087WQL1 TSL:1CDS 5' incomplete
ENSMUST00000188332.7Usp40-206410971aaENSMUSP00000140574.2
 
Nonsense mediated decay
A0A087WRD2 TSL:1
ENSMUST00000187871.2Usp40-2052335No protein-
 
Retained intron
-TSL:NA
ENSMUST00000190446.2Usp40-2092179No protein-
 
Retained intron
-TSL:NA
ENSMUST00000186315.2Usp40-2021725No protein-
 
Retained intron
-TSL:1
ENSMUST00000189586.2Usp40-2081661No protein-
 
Retained intron
-TSL:1
ENSMUST00000186670.2Usp40-203571No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 32, Coding exons: 31, Transcript length: 3,977 bps, Translation length: 1,235 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8BWR4

CCDS

This transcript is a member of the Mouse CCDS set: CCDS78645

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000187758.7

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.