Transcript: ENSMUST00000181166.4 Gm8764-201

Description

predicted gene 8764 [Source:MGI Symbol;Acc:MGI:3643666]

Location

Chromosome 10: 103,996,282-103,998,015 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 15 domains and features, is associated with 87 variant alleles and maps to 269 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000097878.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000181179.5	Gm8764-202	1246	261aa	ENSMUSP00000137930.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QWR4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000181166.4	Gm8764-201	866	261aa	ENSMUSP00000138007.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QWR4	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 866 bps, Translation length: 261 residues

Transcript Support Level (TSL)

TSL:3

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSMUST00000181166.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000181166.4 Gm8764-201

Summary

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Transcript: ENSMUST00000181166.4 Gm8764-201

Summary

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