Transcript: ENSMUST00000179549.3 Ccdc85b-201

Description

coiled-coil domain containing 85B [Source:MGI Symbol;Acc:MGI:2147607]

Location

Chromosome 19: 5,503,208-5,507,922 reverse strand.

About this transcript

This transcript has 1 exon, is annotated with 11 domains and features, is associated with 636 variant alleles and maps to 197 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000095098.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000179549.3	Ccdc85b-201	4715	202aa	ENSMUSP00000137537.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS50357	Q6PDY0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000236881.2	Ccdc85b-202	4165	85aa	ENSMUSP00000157571.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494B9B6	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 4,715 bps, Translation length: 202 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6PDY0

CCDS

This transcript is a member of the Mouse CCDS set: CCDS50357

Transcript Support Level (TSL)

TSL:NA

Version

ENSMUST00000179549.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000179549.3 Ccdc85b-201

Summary

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Transcript: ENSMUST00000179549.3 Ccdc85b-201

Summary

About Us

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