Transcript: ENSMUST00000176572.3 Vmn1r25-201

Description

vomeronasal 1 receptor 25 [Source:MGI Symbol;Acc:MGI:2148529]

Gene Synonyms

V1rc8

Location

Chromosome 6: 57,955,284-57,957,795 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 20 domains and features, is associated with 822 variant alleles and maps to 108 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000115668.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000176572.3	Vmn1r25-201	1101	302aa	ENSMUSP00000135860.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS20189	H3BLP0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000228585.2	Vmn1r25-202	909	302aa	ENSMUSP00000154074.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS20189	H3BLP0	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 1,101 bps, Translation length: 302 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS20189

Transcript Support Level (TSL)

TSL:NA

Version

ENSMUST00000176572.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

inferred transcript model [Definitions]

RNA-Seq supported partial

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000176572.3 Vmn1r25-201

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Transcript: ENSMUST00000176572.3 Vmn1r25-201

Summary

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