Mouse (GRCm39)
Description

cut-like homeobox 1 [Source:MGI Symbol;Acc:MGI:88568]

Gene Synonyms

CDP, Cutl1, Cux, Cux-1

About this transcript

This transcript has 16 exons, is annotated with 9 domains and features, is associated with 4665 variant alleles and maps to 311 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000176172.8Cux1-20648821517aaENSMUSP00000135086.2
 
Protein coding
H3BJQ9 Ensembl CanonicalGENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000004097.16Cux1-201128621426aaENSMUSP00000004097.9
 
Protein coding
CCDS39328E9QKE9 GENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000175975.9Cux1-204109451504aaENSMUSP00000135223.3
 
Protein coding
CCDS71684H3BK24 GENCODE basicAPPRIS P3TSL:1
ENSMUST00000176778.8Cux1-21255201509aaENSMUSP00000135892.2
 
Protein coding
H3BLS0 GENCODE basicAPPRIS ALT2TSL:5
ENSMUST00000176486.9Cux1-20948901389aaENSMUSP00000135370.3
 
Protein coding
H3BKF6 TSL:1CDS 5' incomplete
ENSMUST00000176745.8Cux1-2112831676aaENSMUSP00000135512.2
 
Protein coding
CCDS57391H3BKT0 GENCODE basicTSL:1
ENSMUST00000176216.9Cux1-2072821678aaENSMUSP00000135054.2
 
Protein coding
CCDS71685H3BJN3 GENCODE basicTSL:1
ENSMUST00000175998.8Cux1-2052195472aaENSMUSP00000135816.3
 
Protein coding
H3BLJ7 TSL:5CDS 5' incomplete
ENSMUST00000176423.2Cux1-208805268aaENSMUSP00000135036.3
 
Protein coding
H3BJL7 TSL:3CDS 5' and 3' incomplete
ENSMUST00000175918.9Cux1-2032565199aaENSMUSP00000135606.3
 
Nonsense mediated decay
H3BL09 TSL:5
ENSMUST00000177297.8Cux1-2131926543aaENSMUSP00000134819.2
 
Nonsense mediated decay
H3BJ26 TSL:5
ENSMUST00000163906.2Cux1-2021885No protein-
 
Protein coding CDS not defined
-TSL:1
ENSMUST00000177305.2Cux1-2143290No protein-
 
Retained intron
-TSL:2
ENSMUST00000176501.2Cux1-2101616No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 16, Coding exons: 16, Transcript length: 2,195 bps, Translation length: 472 residues

Transcript Support Level (TSL)

TSL:5

Incomplete CDS

CDS 5' incomplete

Version

ENSMUST00000175998.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.