Mouse (GRCm39)
Description

Pbx/knotted 1 homeobox [Source:MGI Symbol;Acc:MGI:1201409]

Gene Synonyms

D17Wsu76e, PREP1

Location
About this transcript

This transcript has 12 exons, is annotated with 13 domains and features, is associated with 2810 variant alleles and maps to 192 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000097352.11Pknox1-2014252436aaENSMUSP00000094966.4
 
Protein coding
CCDS28608O70477 Ensembl CanonicalGENCODE basicAPPRIS P4TSL:1
ENSMUST00000175806.9Pknox1-2022170436aaENSMUSP00000134852.2
 
Protein coding
CCDS28608O70477 GENCODE basicAPPRIS P4TSL:1
ENSMUST00000237248.2Pknox1-2122014435aaENSMUSP00000157748.2
 
Protein coding
A0A494B9U0 GENCODE basicAPPRIS ALT1
ENSMUST00000176701.4Pknox1-2051778436aaENSMUSP00000135804.2
 
Protein coding
CCDS28608O70477 GENCODE basicAPPRIS P4TSL:1
ENSMUST00000236493.2Pknox1-2101347323aaENSMUSP00000157897.2
 
Protein coding
A0A494BA52 GENCODE basic
ENSMUST00000237038.2Pknox1-2111242325aaENSMUSP00000157491.2
 
Protein coding
A0A494B958 GENCODE basic
ENSMUST00000237748.2Pknox1-2131238324aaENSMUSP00000158343.2
 
Protein coding
A0A494BB27 GENCODE basic
ENSMUST00000235255.2Pknox1-2071156325aaENSMUSP00000157874.2
 
Protein coding
A0A494B958 GENCODE basic
ENSMUST00000235869.2Pknox1-20942619aaENSMUSP00000157430.2
 
Protein coding
A0A494B900 CDS 3' incomplete
ENSMUST00000235401.2Pknox1-208142261aaENSMUSP00000157459.2
 
Nonsense mediated decay
A0A494B934 -
ENSMUST00000237887.2Pknox1-21430441aaENSMUSP00000158053.2
 
Nonsense mediated decay
A0A494BAI2 CDS 5' incomplete
ENSMUST00000176895.2Pknox1-2061855No protein-
 
Retained intron
-TSL:1
ENSMUST00000175812.3Pknox1-203745No protein-
 
Retained intron
-TSL:2
ENSMUST00000176513.2Pknox1-204523No protein-
 
Retained intron
-TSL:2
Statistics

Exons: 12, Coding exons: 10, Transcript length: 2,170 bps, Translation length: 436 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O70477

CCDS

This transcript is a member of the Mouse CCDS set: CCDS28608

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000175806.9

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.