Transcript: ENSMUST00000172190.4 Vmn2r94-201

Description

vomeronasal 2, receptor 94 [Source:MGI Symbol;Acc:MGI:3648050]

Gene Synonyms

EG665227

Location

Chromosome 17: 18,461,384-18,498,018 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 38 domains and features, is associated with 2788 variant alleles and maps to 114 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000090417.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000172190.4	Vmn2r94-201	5153	818aa	ENSMUSP00000126386.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS49971	E9PZK8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000231815.3	Vmn2r94-204	9423	469aa	ENSMUSP00000156288.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A338P793	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000231457.2	Vmn2r94-203	5538	41aa	ENSMUSP00000155968.2	Nonsense mediated decay		A0A338P6T7	-
ENSMUST00000231390.2	Vmn2r94-202	3783	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 5,153 bps, Translation length: 818 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS49971

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000172190.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000172190.4 Vmn2r94-201

Summary

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Transcript: ENSMUST00000172190.4 Vmn2r94-201

Summary

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