Transcript: ENSMUST00000170322.3 Vmn2r113-201

Description

vomeronasal 2, receptor 113 [Source:MGI Symbol;Acc:MGI:3648972]

Gene Synonyms

EG434701

Location

Chromosome 17: 23,161,958-23,184,632 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 42 domains and features, is associated with 1218 variant alleles and maps to 178 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000092111.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000170322.3	Vmn2r113-201	9615	856aa	ENSMUSP00000127981.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS50006	E9PZA6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000234787.2	Vmn2r113-204	9462	805aa	ENSMUSP00000156994.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3Q4EG45	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000234465.2	Vmn2r113-203	10210	514aa	ENSMUSP00000157294.2	Nonsense mediated decay		A0A3Q4EIB3	-
ENSMUST00000234192.2	Vmn2r113-202	17381	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000234875.2	Vmn2r113-205	11442	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 9,615 bps, Translation length: 856 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS50006

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000170322.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000170322.3 Vmn2r113-201

Summary

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Transcript: ENSMUST00000170322.3 Vmn2r113-201

Summary

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