Transcript: ENSMUST00000166581.4 Fga-202

Description

fibrinogen alpha chain [Source:MGI Symbol;Acc:MGI:1316726]

Gene Synonyms

ENSMUSG00000059807, Fib

Location

Chromosome 3: 82,933,522-82,940,934 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 29 domains and features, is associated with 1101 variant alleles and maps to 186 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000028001.17 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000166581.4	Fga-202	2587	789aa	ENSMUSP00000133117.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS50939	E9PV24	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000029630.15	Fga-201	2083	557aa	ENSMUSP00000029630.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS17431	E9PV24-2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,587 bps, Translation length: 789 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: E9PV24

CCDS

This transcript is a member of the Mouse CCDS set: CCDS50939

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000166581.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000166581.4 Fga-202

Summary

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Transcript: ENSMUST00000166581.4 Fga-202

Summary

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