Mouse (GRCm39)
Description

nischarin [Source:MGI Symbol;Acc:MGI:1928323]

Gene Synonyms

1200007D05Rik, 3202002H23Rik, edsn

Location
About this transcript

This transcript has 11 exons, is associated with 1398 variant alleles and maps to 206 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000022469.13Nisch-20155591593aaENSMUSP00000022469.7
 
Protein coding
CCDS36853Q80TM9 Ensembl CanonicalGENCODE basicTSL:2
ENSMUST00000168206.8Nisch-21349901348aaENSMUSP00000132842.2
 
Protein coding
Q80TM9-3 GENCODE basicTSL:1
ENSMUST00000172142.8Nisch-2222780516aaENSMUSP00000132413.2
 
Protein coding
CCDS84107Q80TM9-6 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000165981.8Nisch-2082415472aaENSMUSP00000130210.2
 
Protein coding
Q80TM9-4 GENCODE basicTSL:1
ENSMUST00000171735.2Nisch-2211763153aaENSMUSP00000127132.2
 
Protein coding
Q80TM9-7 GENCODE basicTSL:1
ENSMUST00000169628.8Nisch-2161204333aaENSMUSP00000131465.2
 
Protein coding
F6YR29 TSL:3CDS 5' incomplete
ENSMUST00000167449.2Nisch-210856166aaENSMUSP00000126001.2
 
Protein coding
F7AFP3 TSL:2CDS 5' incomplete
ENSMUST00000170253.8Nisch-218589149aaENSMUSP00000129547.2
 
Protein coding
F6ZL69 TSL:2CDS 5' incomplete
ENSMUST00000164989.8Nisch-2072276334aaENSMUSP00000126982.2
 
Nonsense mediated decay
Q80TM9-5 TSL:1
ENSMUST00000170436.8Nisch-22076145aaENSMUSP00000131861.2
 
Nonsense mediated decay
F6ZL22 TSL:3CDS 5' incomplete
ENSMUST00000169149.8Nisch-21568358aaENSMUSP00000131623.2
 
Nonsense mediated decay
F7AVB2 TSL:3CDS 5' incomplete
ENSMUST00000169906.2Nisch-2171206No protein-
 
Protein coding CDS not defined
-TSL:2
ENSMUST00000170343.8Nisch-219747No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000164956.8Nisch-206736No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000163552.2Nisch-202725No protein-
 
Protein coding CDS not defined
-TSL:2
ENSMUST00000168451.8Nisch-214689No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000167602.2Nisch-211493No protein-
 
Protein coding CDS not defined
-TSL:3
ENSMUST00000164000.2Nisch-204389No protein-
 
Protein coding CDS not defined
-TSL:5
ENSMUST00000164617.2Nisch-2053716No protein-
 
Retained intron
-TSL:1
ENSMUST00000167979.2Nisch-212918No protein-
 
Retained intron
-TSL:2
ENSMUST00000172370.2Nisch-223645No protein-
 
Retained intron
-TSL:2
ENSMUST00000163846.2Nisch-203632No protein-
 
Retained intron
-TSL:2
ENSMUST00000167223.2Nisch-209431No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 11, Coding exons: 10, Transcript length: 2,276 bps, Translation length: 334 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q80TM9

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000164989.8

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.