Mouse (GRCm39)
Description

HPS1, biogenesis of lysosomal organelles complex 3 subunit 1 [Source:MGI Symbol;Acc:MGI:2177763]

Gene Synonyms

6030422N11Rik, Hermansky-Pudlak syndrome 1

Location
About this transcript

This transcript has 16 exons, is annotated with 10 domains and features, is associated with 1981 variant alleles and maps to 184 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000160455.8Hps1-2042952712aaENSMUSP00000125662.2
 
Protein coding
CCDS84439Q3U309 Ensembl CanonicalGENCODE basicTSL:1
ENSMUST00000069298.13Hps1-2023196635aaENSMUSP00000071069.7
 
Protein coding
E9Q045 GENCODE basicTSL:1
ENSMUST00000162004.8Hps1-2082847704aaENSMUSP00000125226.2
 
Protein coding
CCDS37992A0A0R4J062 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000026194.15Hps1-2012647704aaENSMUSP00000026194.9
 
Protein coding
CCDS37992A0A0R4J062 GENCODE basicAPPRIS P1TSL:5
ENSMUST00000162061.2Hps1-2092608627aaENSMUSP00000124209.2
 
Protein coding
E9PYL0 GENCODE basicTSL:1
ENSMUST00000161252.2Hps1-20646224aaENSMUSP00000125483.2
 
Nonsense mediated decay
F7BWJ7 TSL:1CDS 5' incomplete
ENSMUST00000159974.8Hps1-2034189No protein-
 
Retained intron
-TSL:1
ENSMUST00000160621.2Hps1-205692No protein-
 
Retained intron
-TSL:3
ENSMUST00000161761.2Hps1-207389No protein-
 
Retained intron
-TSL:5
Statistics

Exons: 16, Coding exons: 16, Transcript length: 2,608 bps, Translation length: 627 residues

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000162061.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.