Transcript: ENSMUST00000152143.3 Gm15417-203

Description

predicted gene 15417 [Source:MGI Symbol;Acc:MGI:3642531]

Gene Synonyms

ENSMUSG00000074466

Location

Chromosome 3: 89,299,147-89,306,093 forward strand.

About this transcript

This transcript has 2 exons, is associated with 721 variant alleles and maps to 119 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000074466.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000247075.1	Gm15417-212	2488	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000145400.9	Gm15417-202	1527	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000152143.3	Gm15417-203	1291	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000242534.1	Gm15417-207	996	No protein	-	lncRNA	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000126926.3	Gm15417-201	972	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000245631.1	Gm15417-210	873	No protein	-	lncRNA	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000153969.3	Gm15417-204	631	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000246769.1	Gm15417-211	554	No protein	-	lncRNA	-
ENSMUST00000244525.1	Gm15417-209	370	No protein	-	lncRNA	-
ENSMUST00000241096.1	Gm15417-205	350	No protein	-	lncRNA	-
ENSMUST00000241178.1	Gm15417-206	338	No protein	-	lncRNA	-
ENSMUST00000244180.1	Gm15417-208	327	No protein	-	lncRNA	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,291 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENSMUST00000152143.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENSMUST00000152143.3 Gm15417-203

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Transcript: ENSMUST00000152143.3 Gm15417-203

Summary

About Us

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