Transcript: ENSMUST00000150897.8 Nuggc-202

Description

nuclear GTPase, germinal center associated [Source:MGI Symbol;Acc:MGI:2685446]

Gene Synonyms

Gm600, LOC239151, SLIP-GC

Location

Chromosome 14: 65,835,995-65,885,980 forward strand.

About this transcript

This transcript has 19 exons, is annotated with 12 domains and features, is associated with 3747 variant alleles and maps to 164 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000061356.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000079469.7	Nuggc-201	2567	812aa	ENSMUSP00000078434.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56966	D3YY21	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000150897.8	Nuggc-202	2745	796aa	ENSMUSP00000118402.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D3YWJ0	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 19, Coding exons: 18, Transcript length: 2,745 bps, Translation length: 796 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: D3YWJ0

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000150897.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000150897.8 Nuggc-202

Summary

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Transcript: ENSMUST00000150897.8 Nuggc-202

Summary

About Us

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