Mouse (GRCm39)
Description

caldesmon 1 [Source:MGI Symbol;Acc:MGI:88250]

Gene Synonyms

4833423D12Rik, C920027I18Rik

Location
About this transcript

This transcript has 5 exons, is annotated with 13 domains and features, is associated with 1355 variant alleles and maps to 61 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000115027.8Cald1-2054777768aaENSMUSP00000110679.2
 
Protein coding
E9QA15 Ensembl CanonicalGENCODE basicTSL:5
ENSMUST00000079391.10Cald1-2024127534aaENSMUSP00000078362.4
 
Protein coding
E9Q0M9 GENCODE basicAPPRIS ALT1TSL:5
ENSMUST00000115026.8Cald1-2044080536aaENSMUSP00000110678.2
 
Protein coding
CCDS85029E9QA16 GENCODE basicAPPRIS P3TSL:5
ENSMUST00000115021.8Cald1-2034041530aaENSMUSP00000110673.2
 
Protein coding
CCDS39456Q8VCQ8 GENCODE basicTSL:1
ENSMUST00000031775.13Cald1-2012142554aaENSMUSP00000031775.7
 
Protein coding
D3Z6I7 GENCODE basicTSL:5
ENSMUST00000136907.8Cald1-2101063354aaENSMUSP00000121213.2
 
Protein coding
F6T2Z7 TSL:1CDS 5' and 3' incomplete
ENSMUST00000142512.8Cald1-211956253aaENSMUSP00000122926.2
 
Protein coding
E9Q9F3 TSL:3CDS 3' incomplete
ENSMUST00000142716.3Cald1-212821274aaENSMUSP00000116247.2
 
Protein coding
F6QLP8 TSL:5CDS 5' and 3' incomplete
ENSMUST00000123823.8Cald1-206633211aaENSMUSP00000117064.2
 
Protein coding
F6ZAW1 TSL:3CDS 5' and 3' incomplete
ENSMUST00000126181.8Cald1-207413137aaENSMUSP00000121911.2
 
Protein coding
F6RGN9 TSL:5CDS 5' and 3' incomplete
ENSMUST00000149009.8Cald1-2144096534aaENSMUSP00000138368.2
 
Nonsense mediated decay
S4R1T7 TSL:5
ENSMUST00000201956.2Cald1-2183972No protein-
 
Retained intron
-TSL:NA
ENSMUST00000155714.8Cald1-2161422No protein-
 
Retained intron
-TSL:1
ENSMUST00000201024.2Cald1-2171264No protein-
 
Retained intron
-TSL:NA
ENSMUST00000154182.8Cald1-215743No protein-
 
Retained intron
-TSL:1
ENSMUST00000132331.2Cald1-209674No protein-
 
Retained intron
-TSL:2
ENSMUST00000127055.2Cald1-208667No protein-
 
Retained intron
-TSL:2
ENSMUST00000146685.2Cald1-213262No protein-
 
Retained intron
-TSL:3
Statistics

Exons: 5, Coding exons: 5, Transcript length: 821 bps, Translation length: 274 residues

Transcript Support Level (TSL)

TSL:5

Incomplete CDS

CDS 5' and 3' incomplete

Version

ENSMUST00000142716.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.