Mouse (GRCm39)
Description

sodium channel, voltage-gated, type I, alpha [Source:MGI Symbol;Acc:MGI:98246]

Gene Synonyms

Nav1.1

Location
About this transcript

This transcript has 27 exons, is annotated with 72 domains and features, is associated with 8980 variant alleles and maps to 413 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000112366.8Scn1a-20383862009aaENSMUSP00000107985.2
 
Protein coding
CCDS84530A2APX8 Ensembl CanonicalGENCODE basicAPPRIS P1TSL:5
ENSMUST00000138910.4Scn1a-20582901998aaENSMUSP00000116881.4
 
Protein coding
CCDS38131A2APX9 TSL:5
ENSMUST00000077489.12Scn1a-20181161998aaENSMUSP00000076697.6
 
Protein coding
CCDS38131A2APX8-2 GENCODE basicTSL:5
ENSMUST00000094951.10Scn1a-20259461981aaENSMUSP00000092558.4
 
Protein coding
A2APX8-3 GENCODE basicTSL:5
ENSMUST00000156865.3Scn1a-2062659502aaENSMUSP00000144633.2
 
Protein coding
A0A0J9YVF2 TSL:1CDS 5' incomplete
ENSMUST00000200839.4Scn1a-2073562303aaENSMUSP00000144214.2
 
Nonsense mediated decay
A0A0J9YUJ5 TSL:5CDS 5' incomplete
ENSMUST00000129508.2Scn1a-2042978No protein-
 
Retained intron
-TSL:1
Statistics

Exons: 27, Coding exons: 26, Transcript length: 8,290 bps, Translation length: 1,998 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS38131

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000138910.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.