Transcript: ENSMUST00000136766.2 Serpinb13-202

Description

serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 13 [Source:MGI Symbol;Acc:MGI:3042250]

Gene Synonyms

HUR7, HURPIN, PI13, headpin

Location

Chromosome 1: 106,908,724-106,928,628 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 1 domain and feature, is associated with 1644 variant alleles and maps to 93 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000048775.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000027564.8	Serpinb13-201	1607	389aa	ENSMUSP00000027564.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS15213	Q8CDC0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000136766.2	Serpinb13-202	1247	110aa	ENSMUSP00000118572.2	Nonsense mediated decay		D6RHN5	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 8, Coding exons: 4, Transcript length: 1,247 bps, Translation length: 110 residues

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000136766.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000136766.2 Serpinb13-202

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Transcript: ENSMUST00000136766.2 Serpinb13-202

Summary

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